[INFO] fetching crate nons 0.1.0...
[INFO] checking nons-0.1.0 against master#82310651b93a594a3fd69015e1562186a080d94c for pr-145770
[INFO] extracting crate nons 0.1.0 into /workspace/builds/worker-7-tc1/source
[INFO] started tweaking crates.io crate nons 0.1.0
[INFO] finished tweaking crates.io crate nons 0.1.0
[INFO] tweaked toml for crates.io crate nons 0.1.0 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate nons 0.1.0 on toolchain 82310651b93a594a3fd69015e1562186a080d94c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 57 packages to latest compatible versions
[INFO] [stderr]       Adding bio v0.14.2 (available: v2.3.0)
[INFO] [stderr]       Adding rust-htslib v0.12.1 (available: v0.50.0)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr] `license` should be used if the package license can be expressed with a standard SPDX expression.
[INFO] [stderr] `license-file` should be used if the package uses a non-standard license.
[INFO] [stderr] See https://doc.rust-lang.org/cargo/reference/manifest.html#the-license-and-license-file-fields for more information.
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded matrixmultiply v0.1.15
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded rawpointer v0.1.0
[INFO] [stderr]   Downloaded bytecount v0.1.7
[INFO] [stderr]   Downloaded multimap v0.4.0
[INFO] [stderr]   Downloaded ndarray v0.9.1
[INFO] [stderr]   Downloaded itertools v0.6.5
[INFO] [stderr]   Downloaded csv v0.15.0
[INFO] [stderr]   Downloaded rust-htslib v0.12.1
[INFO] [stderr]   Downloaded bio v0.14.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 34ecc55b0de73273ebf2806d888a1a8afee34196effdc25dfc7c0d20548971a9
[INFO] running `Command { std: "docker" "start" "-a" "34ecc55b0de73273ebf2806d888a1a8afee34196effdc25dfc7c0d20548971a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "34ecc55b0de73273ebf2806d888a1a8afee34196effdc25dfc7c0d20548971a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "34ecc55b0de73273ebf2806d888a1a8afee34196effdc25dfc7c0d20548971a9", kill_on_drop: false }`
[INFO] [stdout] 34ecc55b0de73273ebf2806d888a1a8afee34196effdc25dfc7c0d20548971a9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e23829372e81d2e31d5718d2d2a5ed77ac8982f4e4f7e19b74c0a420c2a2e7bf
[INFO] running `Command { std: "docker" "start" "-a" "e23829372e81d2e31d5718d2d2a5ed77ac8982f4e4f7e19b74c0a420c2a2e7bf", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr] `license` should be used if the package license can be expressed with a standard SPDX expression.
[INFO] [stderr] `license-file` should be used if the package uses a non-standard license.
[INFO] [stderr] See https://doc.rust-lang.org/cargo/reference/manifest.html#the-license-and-license-file-fields for more information.
[INFO] [stderr]    Compiling autocfg v1.5.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.101
[INFO] [stderr]    Compiling unicode-ident v1.0.18
[INFO] [stderr]    Compiling libc v0.2.175
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking tinyvec_macros v0.1.1
[INFO] [stderr]    Compiling serde v1.0.219
[INFO] [stderr]     Checking either v1.15.0
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]     Checking void v1.0.2
[INFO] [stderr]     Checking lazy_static v1.5.0
[INFO] [stderr]     Checking unicode-bidi v0.3.18
[INFO] [stderr]    Compiling ndarray v0.9.1
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]     Checking matches v0.1.10
[INFO] [stderr]     Checking memchr v2.7.5
[INFO] [stderr]     Checking tinyvec v1.10.0
[INFO] [stderr]     Checking ucd-util v0.1.10
[INFO] [stderr]     Checking rawpointer v0.1.0
[INFO] [stderr]     Checking thread_local v0.3.6
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking regex-syntax v0.5.6
[INFO] [stderr]     Checking unreachable v1.0.0
[INFO] [stderr]     Checking lazy_static v0.2.11
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]     Checking itertools v0.6.5
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking rustc-serialize v0.3.25
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling num-complex v0.1.44
[INFO] [stderr]     Checking percent-encoding v1.0.1
[INFO] [stderr]    Compiling rust-htslib v0.12.1
[INFO] [stderr]     Checking bit-vec v0.4.4
[INFO] [stderr]     Checking utf8-ranges v1.0.5
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking bit-set v0.4.0
[INFO] [stderr]     Checking unicode-normalization v0.1.24
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking bitflags v0.9.1
[INFO] [stderr]     Checking approx v0.1.1
[INFO] [stderr]     Checking bytecount v0.1.7
[INFO] [stderr]     Checking aho-corasick v0.6.10
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]     Checking idna v0.1.5
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]     Checking num-traits v0.1.43
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v0.5.2
[INFO] [stderr]     Checking memchr v1.0.2
[INFO] [stderr]     Checking url v1.7.2
[INFO] [stderr]     Checking csv v0.15.0
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.4.0
[INFO] [stderr]     Checking bio v0.14.2
[INFO] [stdout] error: cannot find derive macro `RustcDecodable` in this scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/io/fasta.rs:350:10
[INFO] [stdout]     |
[INFO] [stdout] 350 | #[derive(RustcDecodable, Debug, Copy, Clone)]
[INFO] [stdout]     |          ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcEncodable` in this scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/io/bed.rs:128:10
[INFO] [stdout]     |
[INFO] [stdout] 128 | #[derive(RustcEncodable, Default)]
[INFO] [stdout]     |          ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcDecodable` in this scope
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/stats/probs/mod.rs:39:1
[INFO] [stdout]    |
[INFO] [stdout] 39 | / custom_derive! {
[INFO] [stdout] 40 | |     /// A newtype for probabilities.
[INFO] [stdout] 41 | |     ///
[INFO] [stdout] 42 | |     /// # Example
[INFO] [stdout] ...  |
[INFO] [stdout] 74 | |     pub struct Prob(pub f64);
[INFO] [stdout] 75 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = note: this error originates in the macro `custom_derive` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcEncodable` in this scope
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/stats/probs/mod.rs:39:1
[INFO] [stdout]    |
[INFO] [stdout] 39 | / custom_derive! {
[INFO] [stdout] 40 | |     /// A newtype for probabilities.
[INFO] [stdout] 41 | |     ///
[INFO] [stdout] 42 | |     /// # Example
[INFO] [stdout] ...  |
[INFO] [stdout] 74 | |     pub struct Prob(pub f64);
[INFO] [stdout] 75 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = note: this error originates in the macro `custom_derive` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcDecodable` in this scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/stats/probs/mod.rs:89:1
[INFO] [stdout]     |
[INFO] [stdout] 89  | / custom_derive! {
[INFO] [stdout] 90  | |     /// A newtype for log-scale probabilities.
[INFO] [stdout] 91  | |     ///
[INFO] [stdout] 92  | |     /// # Example
[INFO] [stdout] ...   |
[INFO] [stdout] 125 | |     pub struct LogProb(pub f64);
[INFO] [stdout] 126 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `custom_derive` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcEncodable` in this scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/stats/probs/mod.rs:89:1
[INFO] [stdout]     |
[INFO] [stdout] 89  | / custom_derive! {
[INFO] [stdout] 90  | |     /// A newtype for log-scale probabilities.
[INFO] [stdout] 91  | |     ///
[INFO] [stdout] 92  | |     /// # Example
[INFO] [stdout] ...   |
[INFO] [stdout] 125 | |     pub struct LogProb(pub f64);
[INFO] [stdout] 126 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `custom_derive` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcDecodable` in this scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/stats/probs/mod.rs:129:1
[INFO] [stdout]     |
[INFO] [stdout] 129 | / custom_derive! {
[INFO] [stdout] 130 | |     /// A newtype for PHRED-scale probabilities.
[INFO] [stdout] 131 | |     ///
[INFO] [stdout] 132 | |     /// # Example
[INFO] [stdout] ...   |
[INFO] [stdout] 160 | |     pub struct PHREDProb(pub f64);
[INFO] [stdout] 161 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `custom_derive` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: cannot find derive macro `RustcEncodable` in this scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/stats/probs/mod.rs:129:1
[INFO] [stdout]     |
[INFO] [stdout] 129 | / custom_derive! {
[INFO] [stdout] 130 | |     /// A newtype for PHRED-scale probabilities.
[INFO] [stdout] 131 | |     ///
[INFO] [stdout] 132 | |     /// # Example
[INFO] [stdout] ...   |
[INFO] [stdout] 160 | |     pub struct PHREDProb(pub f64);
[INFO] [stdout] 161 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `custom_derive` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: the trait bound `IndexRecord: Decodable` is not satisfied
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/io/fasta.rs:112:31
[INFO] [stdout]     |
[INFO] [stdout] 112 |         for row in fai_reader.decode() {
[INFO] [stdout]     |                               ^^^^^^ the trait `Decodable` is not implemented for `IndexRecord`
[INFO] [stdout]     |
[INFO] [stdout]     = help: the following other types implement trait `Decodable`:
[INFO] [stdout]               ()
[INFO] [stdout]               (T0, T1, T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T1, T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T10, T11)
[INFO] [stdout]               (T11,)
[INFO] [stdout]               (T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]             and 71 others
[INFO] [stdout]     = note: required for `(std::string::String, IndexRecord)` to implement `Decodable`
[INFO] [stdout] note: required by a bound in `csv::Reader::<R>::decode`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/csv-0.15.0/src/reader.rs:279:26
[INFO] [stdout]     |
[INFO] [stdout] 279 |     pub fn decode<'a, D: Decodable>(&'a mut self) -> DecodedRecords<'a, R, D> {
[INFO] [stdout]     |                          ^^^^^^^^^ required by this bound in `Reader::<R>::decode`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: the trait bound `IndexRecord: Decodable` is not satisfied
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/io/fasta.rs:112:20
[INFO] [stdout]     |
[INFO] [stdout] 112 |         for row in fai_reader.decode() {
[INFO] [stdout]     |                    ^^^^^^^^^^^^^^^^^^^ the trait `Decodable` is not implemented for `IndexRecord`
[INFO] [stdout]     |
[INFO] [stdout]     = help: the following other types implement trait `Decodable`:
[INFO] [stdout]               ()
[INFO] [stdout]               (T0, T1, T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T1, T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T10, T11)
[INFO] [stdout]               (T11,)
[INFO] [stdout]               (T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]             and 71 others
[INFO] [stdout]     = note: required for `(std::string::String, IndexRecord)` to implement `Decodable`
[INFO] [stdout]     = note: required for `DecodedRecords<'_, R, (std::string::String, IndexRecord)>` to implement `Iterator`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: the trait bound `bed::Record: Encodable` is not satisfied
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-0.14.2/src/io/bed.rs:120:31
[INFO] [stdout]     |
[INFO] [stdout] 120 |             self.inner.encode(record)
[INFO] [stdout]     |                        ------ ^^^^^^ the trait `Encodable` is not implemented for `bed::Record`
[INFO] [stdout]     |                        |
[INFO] [stdout]     |                        required by a bound introduced by this call
[INFO] [stdout]     |
[INFO] [stdout]     = help: the following other types implement trait `Encodable`:
[INFO] [stdout]               &'a T
[INFO] [stdout]               ()
[INFO] [stdout]               (T0, T1, T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T1, T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T10, T11)
[INFO] [stdout]               (T11,)
[INFO] [stdout]               (T2, T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]               (T3, T4, T5, T6, T7, T8, T9, T10, T11)
[INFO] [stdout]             and 75 others
[INFO] [stdout]     = note: required for `&bed::Record` to implement `Encodable`
[INFO] [stdout] note: required by a bound in `csv::Writer::<W>::encode`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/csv-0.15.0/src/writer.rs:208:62
[INFO] [stdout]     |
[INFO] [stdout] 208 |     pub fn encode<E>(&mut self, e: E) -> Result<()> where E: Encodable {
[INFO] [stdout]     |                                                              ^^^^^^^^^ required by this bound in `Writer::<W>::encode`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0277`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `bio` (lib) due to 11 previous errors
[INFO] running `Command { std: "docker" "inspect" "e23829372e81d2e31d5718d2d2a5ed77ac8982f4e4f7e19b74c0a420c2a2e7bf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e23829372e81d2e31d5718d2d2a5ed77ac8982f4e4f7e19b74c0a420c2a2e7bf", kill_on_drop: false }`
[INFO] [stdout] e23829372e81d2e31d5718d2d2a5ed77ac8982f4e4f7e19b74c0a420c2a2e7bf
